DNA Binding Motif
| Accessions: | MA1656.1 (JASPAR 2024) |
| Names: | ZNF449 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 14 |
| Consensus: | cvaAGCCCAACcas |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1809 2716 1566 1569 c 02 2104 2320 1921 1315 v 03 4135 1759 1463 303 a 04 6239 582 224 615 A 05 108 92 7368 92 G 06 139 7088 322 111 C 07 64 7540 28 28 C 08 68 7479 54 59 C 09 6851 300 182 327 A 10 6620 96 829 115 A 11 184 7244 167 65 C 12 1143 5029 473 1015 c 13 2595 1875 1585 1605 a 14 1670 2195 2237 1558 s |
| Type: | Heterodimer |
| Binding TFs: | Q6P9G9 (Zinc finger, C2H2 type, SCAN domain, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) Q6P9G9 |
| Binding Sites: | MA1656.1.1 MA1656.1.10 MA1656.1.11 MA1656.1.12 MA1656.1.13 / MA1656.1.3 MA1656.1.14 / MA1656.1.4 MA1656.1.15 / MA1656.1.5 MA1656.1.16 / MA1656.1.6 MA1656.1.17 / MA1656.1.7 MA1656.1.18 MA1656.1.19 / MA1656.1.8 MA1656.1.2 MA1656.1.20 / MA1656.1.9 MA1656.1.3 MA1656.1.2 / MA1656.1.4 MA1656.1.5 MA1656.1.6 MA1656.1.7 MA1656.1.8 MA1656.1.9 MA1656.1.1 MA1656.1.10 MA1656.1.11 MA1656.1.12 MA1656.1.13 MA1656.1.14 MA1656.1.15 MA1656.1.16 MA1656.1.17 MA1656.1.18 MA1656.1.19 MA1656.1.20 |
| Publications: | Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.