DNA Binding Motif

						

			
Accessions: POU2F1_SOX15_2_3 (HumanTF2 1.0)

			
Names: POU2F1_SOX15
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 16
Consensus: ywtGmATAACAAwrra
Weblogo: 
PSSM: P0      A      C      G      T
01   2002   3722   1279   3521      y
02   4454   1963    593   3514      w
03   2343   2182   1408   4590      t
04   1539    577  10524    274      G
05   4104   6421    176    682      m
06  10524    674     16    221      A
07    172     46    202  10524      T
08  10524   1169   2232    430      A
09  10524    213      9    710      A
10     44  10524   1070   1021      C
11  10524     22     72    211      A
12  10524    289     47    105      A
13   5018    288    109   5506      w
14   4317    717   6207   1022      r
15   3690   2059   6835    173      r
16   4873   1939   2153   1559      a
Type: Heterodimer
Binding TFs: POU2F1_TF1 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
SOX15_TF2 (HMG (high mobility group) box, Domain of unknown function (DUF1898))
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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