DNA Binding Motif

Accessions: MA1642.2 (JASPAR 2024)
Names: NEUROG2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 7
Consensus: CAGATGG
Weblogo:
PSSM: P0 A C G T
01 278 33559 317 237 C
02 33720 211 301 159 A
03 400 793 30392 2806 G
04 32746 952 418 275 A
05 649 904 323 32515 T
06 280 205 33422 484 G
07 1523 2966 24998 4904 G
Type: Heterodimer
Binding TFs: Q9H2A3 (Helix-loop-helix DNA-binding domain)
Q9H2A3
Binding Sites: MA1642.2.10 / MA1642.2.11 / MA1642.2.12 / MA1642.2.15 / MA1642.2.17 / MA1642.2.18 / MA1642.2.2 / MA1642.2.20 / MA1642.2.3 / MA1642.2.5 / MA1642.2.6 / MA1642.2.7 / MA1642.2.8
MA1642.2.13 / MA1642.2.9
MA1642.2.16
MA1642.2.1 / MA1642.2.19 / MA1642.2.4
MA1642.2.14
Publications: Henke RM, Meredith DM, Borromeo MD, Savage TK, Johnson JE. Ascl1 and Neurog2 form novel complexes and regulate Delta-like3 (Dll3) expression in the neural tube. Dev Biol 328:529-40 (2009). [Pubmed]

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