DNA Binding Motif

Accessions: MA1527.2 (JASPAR 2024)
Names: NFIC
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 15
Consensus: TTGGCrysgTGCCAr
Weblogo:
PSSM: P0 A C G T
01 167 616 65 2118 T
02 0 0 5 2118 T
03 0 0 2118 0 G
04 0 3 2118 0 G
05 100 2118 0 0 C
06 696 268 694 461 r
07 389 705 492 531 y
08 443 580 678 417 s
09 476 382 881 379 g
10 203 340 97 2118 T
11 0 0 2118 0 G
12 0 2118 13 0 C
13 3 2118 0 0 C
14 2118 0 0 0 A
15 1086 19 1032 154 r
Type: Heterodimer
Binding TFs: P08651 (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus)
P08651
Publications: Heng YH, Barry G, Richards LJ, Piper M. Nuclear factor I genes regulate neuronal migration. Neurosignals : (2012;20(3):159-67.). [Pubmed]

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