DNA Binding Motif
| Accessions: | UN0375.1 (JASPAR 2024), MA2048.1 (JASPAR 2024) |
| Names: | NAC045 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 13 |
| Consensus: | mwsAAGCAAccww |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 446 353 263 342 m 02 531 193 304 376 w 03 112 367 814 111 s 04 1389 4 5 6 A 05 1327 52 16 9 A 06 23 11 1354 16 G 07 84 1158 41 121 C 08 1328 17 11 48 A 09 1352 3 10 39 A 10 148 917 142 197 c 11 287 695 172 250 c 12 364 238 263 539 w 13 444 330 250 380 w |
| Type: | Heterodimer |
| Binding TFs: | A4VCM0 (No apical meristem (NAM) protein) A4VCM0 |
| Binding Sites: | UN0375.1.10 UN0375.1.12 MA2048.1.11 / UN0375.1.16 MA2048.1.15 MA2048.1.2 / UN0375.1.2 MA2048.1.5 / UN0375.1.5 UN0375.1.6 MA2048.1.6 / UN0375.1.7 MA2048.1.1 / UN0375.1.1 MA2048.1.8 / UN0375.1.11 MA2048.1.9 / UN0375.1.13 UN0375.1.14 MA2048.1.10 / UN0375.1.15 MA2048.1.12 / UN0375.1.17 MA2048.1.13 / UN0375.1.18 UN0375.1.19 MA2048.1.14 / UN0375.1.20 MA2048.1.3 / UN0375.1.3 MA2048.1.4 / UN0375.1.4 UN0375.1.8 MA2048.1.7 / UN0375.1.9 MA2048.1.17 MA2048.1.16 MA2048.1.18 MA2048.1.19 MA2048.1.20 |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.