DNA Binding Motif

						

			
Accessions: GATA5_methyl_2 (HT-SELEX2 May2017)

			
Names: GATA5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: wGATAAcGATCT
Weblogo: 
PSSM: P0      A      C      G      T
01    698     62     17    578      w
02      6     16   1276      6      G
03   1276      7      6     19      A
04      3      7      4   1276      T
05   1276     11     10    211      A
06   1276     31    216     82      A
07    303   1276    479    242      c
08    397     87   1276     49      G
09   1276     36     19     35      A
10     53     27     43   1276      T
11     59   1276     41     62      C
12    357     54     76   1276      T
Binding TFs: GATA5 (GATA zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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