DNA Binding Motif

						

			
Accessions: 1hw2_B (3D-footprint 20231221)

			
Names: FATTY ACID METABOLISM REGULATOR PROTEIN
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
Length: 7
Consensus: tGGtncg
Weblogo: 
PSSM: P0      A      C      G      T
01     12     12     12     60      t
02      0      0     96      0      G
03      3      3     85      5      G
04     16     19     16     45      t
05     24     24     24     24      n
06     12     60     12     12      c
07     12     12     60     12      g
Binding TFs: 1hw2_B (Bacterial regulatory proteins, gntR family, FadR C-terminal domain)
Binding Sites: 1hw2_D
1hw2_E
			
Publications: Xu Y., Heath RJ., Li Z., Rock CO., White SW. The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli. J Biol Chem. 276(20):17373-9 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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