DNA Binding Motif

						

			
Accessions: M0657 (AthalianaCistrome v4_May2016)

			
Names: T05369;, VND4.ampDAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CKTraaawwcAMGcAA
Weblogo: 
PSSM: P0      A      C      G      T
01     45    552      0      0      C
02      0      0    418    179      K
03      0      0      0    597      T
04    319     25    253      0      r
05    273    100     95    129      a
06    273     92    141     91      a
07    218     97    136    146      a
08    218    120     55    204      w
09    242     55     95    205      w
10     36    325    109    127      c
11    595      2      0      0      A
12    406    191      0      0      M
13      0      0    575     22      G
14     63    371     34    129      c
15    433     55      9    100      A
16    544      0      0     53      A
Binding TFs: T05369 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.