DNA Binding Motif

						

			
Accessions: MA1110.3 (JASPAR 2024)

			
Names: Nr1H4
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 6
Consensus: AGGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01   4597     83     49      7      A
02     13    150   4542     31      G
03     31      4   4671     30      G
04      1      0      0   4735      T
05    163   4351     10    212      C
06   4589     29    118      0      A
Type: Heterodimer
Binding TFs: Q60641 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Q60641
Binding Sites: MA1110.3.15
MA1110.3.1 / MA1110.3.10 / MA1110.3.11 / MA1110.3.12 / MA1110.3.13 / MA1110.3.14 / MA1110.3.16 / MA1110.3.17 / MA1110.3.18 / MA1110.3.19 / MA1110.3.2 / MA1110.3.4 / MA1110.3.5 / MA1110.3.6 / MA1110.3.7 / MA1110.3.8 / MA1110.3.9
MA1110.3.20
MA1110.3.3
			
Publications: Hoeke MO, Heegsma J, Hoekstra M, Moshage H, Faber KN. Human FXR regulates SHP expression through direct binding to an LRH-1 binding site, independent of an IR-1 and LRH-1. PLoS One : (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.