DNA Binding Motif

						

			
Accessions: GLI3_methyl_1 (HT-SELEX2 May2017)

			
Names: GLI3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: rGACCACCCACrwwG
Weblogo: 
PSSM: P0      A      C      G      T
01   3469    413   3044    402      r
02      0      3   6815     29      G
03   6593    268    281     14      A
04      0   6839      5      3      C
05      0   6836      6      0      C
06   6773     27      2     18      A
07      0   6833      5      5      C
08   1814   6007      8      1      C
09     36   6712      2    118      C
10   6675      0    229      0      A
11   1251   5702    679    732      C
12   2176   1250   3812    662      r
13   2562    904   1662   3520      w
14   3405    224    917   3146      w
15     70    976   6314    374      G
Binding TFs: GLI3 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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