DNA Binding Motif

						

			
Accessions: TFAP4_methyl_5 (HT-SELEX2 May2017)

			
Names: TFAP4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: awCAGCTGwt
Weblogo: 
PSSM: P0      A      C      G      T
01   7238   2059   2377    859      a
02   3265   1505    322   3974      w
03      2   7238      4      1      C
04   7238      0     11     11      A
05     10    148   7238    106      G
06     71   7238    141      6      C
07      3      8      6   7238      T
08      0      6   7238      0      G
09   4005    415   1422   3233      w
10    890   2315   2058   7238      t
Binding TFs: TFAP4 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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