DNA Binding Motif

						

			
Accessions: USF1_HUMAN.H10MO.A|M01591 (HOCOMOCO 10), USF1_MOUSE.H10MO.A|M01405 (HOCOMOCO 10)

			
Names: USF1
Organisms: Homo sapiens, Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: bHLH-ZIP factors{1.2.6}; USF factors{1.2.6.2}
Length: 10
Consensus: gGTCACGTGr
Weblogo: 
PSSM: P0      A      C      G      T
01    399    196   1008    128      g
02    282      8   1441      0      G
03     31    191     41   1468      T
04      0   1728      3      0      C
05   1730      1      0      0      A
06      4   1623     41     63      C
07    147      9   1575      0      G
08      8      5      8   1710      T
09      0      0   1731      0      G
10    626    230    720    155      r
Type: Heterodimer
Binding TFs: USF1_MOUSE (Helix-loop-helix DNA-binding domain)
USF1_HUMAN (Helix-loop-helix DNA-binding domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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