DNA Binding Motif
| Accessions: | UN0347.1 (JASPAR 2024), MA2035.1 (JASPAR 2024) |
| Names: | ANAC075, NAC075 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 24 |
| Consensus: | waaGwAgCTTGtwswacAAGcTwy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 249 151 168 225 w 02 297 148 162 186 a 03 404 80 174 135 a 04 113 41 585 54 G 05 455 30 30 278 w 06 591 12 73 117 A 07 163 40 476 114 g 08 17 766 2 8 C 09 1 3 113 676 T 10 0 0 1 792 T 11 71 164 543 15 G 12 177 74 26 516 t 13 238 145 185 225 w 14 163 230 241 159 s 15 237 176 139 241 w 16 510 23 83 177 a 17 13 516 188 76 c 18 788 1 3 1 A 19 677 112 0 4 A 20 8 1 770 14 G 21 110 459 65 159 c 22 142 83 19 549 T 23 412 52 68 261 w 24 147 339 85 222 y |
| Type: | Heterodimer |
| Binding TFs: | Q9M0F8 (No apical meristem (NAM) protein) Q9M0F8 |
| Binding Sites: | UN0347.1.9 UN0347.1.10 UN0347.1.3 UN0347.1.4 MA2035.1.1 / UN0347.1.1 UN0347.1.11 UN0347.1.12 UN0347.1.13 UN0347.1.14 UN0347.1.15 MA2035.1.3 / UN0347.1.16 MA2035.1.4 / UN0347.1.17 UN0347.1.18 UN0347.1.19 UN0347.1.2 UN0347.1.20 UN0347.1.5 MA2035.1.2 / UN0347.1.6 UN0347.1.7 UN0347.1.8 MA2035.1.6 MA2035.1.10 MA2035.1.11 MA2035.1.12 MA2035.1.13 MA2035.1.14 MA2035.1.15 MA2035.1.16 MA2035.1.17 MA2035.1.18 MA2035.1.19 MA2035.1.20 MA2035.1.5 MA2035.1.7 MA2035.1.8 MA2035.1.9 |
| Publications: | Zhong R, Lee C, Ye ZH. Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Mol Plant 3:1087-103 (2010). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.