DNA Binding Motif

						

			
Accessions: CUX1_DBD_1 (HumanTF 1.0)

			
Names: CUX1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 17
Consensus: ATCrATmmstrATCrAT
Weblogo: 
PSSM: P0      A      C      G      T
01  18540    217    645    948      A
02    327    549    252  18540      T
03    448  18540    307   1083      C
04   5977    268  12562    219      r
05  18540    196    221    332      A
06   1598    565    195  18540      T
07   7788   4732   2182   3837      m
08   7150   5224   3370   2796      m
09   4224   6088   4885   3344      s
10   3402   3307   3606   8224      t
11   6466   1417   6842   3814      r
12  18540    217    639    793      A
13    245    338    184  18540      T
14    353  18540    235    371      C
15   7775    308  10764    196      r
16  18540    198    246    478      A
17   1425    414    165  18540      T
Binding TFs: CUX1_DBD (Homeobox domain, CUT domain, Homeobox KN domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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