DNA Binding Motif
| Accessions: | 3igm_A (3D-footprint 20231221) |
| Names: | PF14_0633 protein |
| Organisms: | isolate 3D7, Plasmodium falciparum |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA |
| Length: | 7 |
| Consensus: | tGCaTGC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 12 10 10 64 t 02 0 0 96 0 G 03 2 74 10 10 C 04 64 10 12 10 a 05 0 0 0 96 T 06 0 0 96 0 G 07 0 96 0 0 C |
| Binding TFs: | 3igm_A (AP2 domain) |
| Binding Sites: | 3igm_C 3igm_D |
| Publications: | Lindner S.E, De Silva E.K, Keck J.L, Llinás M. Structural determinants of DNA binding by a P. falciparum ApiAP2 transcriptional regulator. Journal of molecular biology 395:558-67 (2010). [Pubmed] |
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