DNA Binding Motif

Accessions: UN0736.1 (JASPAR 2024)
Names: pax-3
Organisms: Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 8
Consensus: ckGATwAG
Weblogo:
PSSM: P0 A C G T
01 36 190 39 39 c
02 10 8 147 139 k
03 15 2 279 8 G
04 298 0 5 1 A
05 2 7 1 294 T
06 137 1 4 162 w
07 298 2 2 2 A
08 24 21 228 31 G
Binding TFs: G5ED66
Binding Sites: UN0736.1.14
UN0736.1.13 / UN0736.1.15
UN0736.1.8
UN0736.1.5
UN0736.1.10 / UN0736.1.7
UN0736.1.18 / UN0736.1.19
UN0736.1.9
UN0736.1.1
UN0736.1.11
UN0736.1.12 / UN0736.1.17
UN0736.1.16
UN0736.1.2 / UN0736.1.3
UN0736.1.20
UN0736.1.4
UN0736.1.6

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.