DNA Binding Motif
| Accessions: | MA1359.2 (JASPAR 2024) |
| Names: | BPE |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 14 |
| Consensus: | rwgcCACGTGgcay |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 109 83 110 94 r 02 101 79 74 142 w 03 90 72 162 72 g 04 76 162 87 71 c 05 1 393 2 0 C 06 396 0 0 0 A 07 0 388 0 8 C 08 9 0 387 0 G 09 0 0 0 396 T 10 0 2 393 1 G 11 72 85 162 77 g 12 73 161 72 90 c 13 142 75 81 98 a 14 95 108 85 108 y |
| Type: | Heterodimer |
| Binding TFs: | Q0JXE7 (Helix-loop-helix DNA-binding domain) Q0JXE7 |
| Binding Sites: | MA1359.2.1 MA1359.2.10 MA1359.2.11 MA1359.2.12 MA1359.2.13 MA1359.2.14 MA1359.2.15 MA1359.2.16 MA1359.2.17 MA1359.2.18 MA1359.2.19 MA1359.2.2 MA1359.2.20 MA1359.2.3 MA1359.2.4 MA1359.2.5 MA1359.2.6 MA1359.2.7 MA1359.2.8 MA1359.2.9 |
| Publications: | Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.