DNA Binding Motif

						

			
Accessions: UN0210.2 (JASPAR 2024)

			
Names: ZNF623
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 20
Consensus: GTGCAAAGGCCCTGrGGyaG
Weblogo: 
PSSM: P0      A      C      G      T
01    624     48   3736     39      G
02    126     96    100   4125      T
03    178     22   4160     87      G
04     20   4354      9     64      C
05   4221    159     33     34      A
06   4395     15     33      4      A
07   4253     12    155     27      A
08    109     24   4173    141      G
09    145     18   4211     73      G
10     46   3517    143    741      C
11    162   4203     18     64      C
12     35   4362      6     44      C
13    254    232     88   3873      T
14     79     18   4336     14      G
15   2433    126   1144    744      r
16    133     17   4270     27      G
17    191     83   4093     80      G
18    139   2608     82   1618      y
19   2604    396   1030    417      a
20    722    231   3168    326      G
Type: Heterodimer
Binding TFs: O75123 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
O75123 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
O75123
Binding Sites: UN0210.2.1 / UN0210.2.5
UN0210.2.10 / UN0210.2.3 / UN0210.2.6
UN0210.2.11
UN0210.2.12
UN0210.2.13 / UN0210.2.17 / UN0210.2.4 / UN0210.2.8
UN0210.2.14
UN0210.2.15
UN0210.2.16
UN0210.2.18
UN0210.2.19
UN0210.2.2
UN0210.2.20 / UN0210.2.7
UN0210.2.9
			
	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.