DNA Binding Motif

						

			
Accessions: Egr3_DBD (HumanTF 1.0)

			
Names: Egr3
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 15
Consensus: wmCGCCCACGCAhwt
Weblogo: 
PSSM: P0      A      C      G      T
01    560    431    167    630      w
02   1179    580     13     21      m
03      0   1833      5     11      C
04     39     14   2099     20      G
05      1   1818      2      4      C
06      8   1819      4      4      C
07      4   1775      5     82      C
08   1370    350      0      3      A
09      0   1828      3      2      C
10      9     15   2083     19      G
11      3   1832      0     16      C
12   1477     51    103     35      A
13    558    474    138    594      h
14    532    208    155    889      w
15    424    389    254    753      t
Binding TFs: Egr3_DBD (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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