DNA Binding Motif

						

			
Accessions: Foxj3_DBD_4 (HumanTF 1.0)

			
Names: Foxj3
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 13
Consensus: rTAAACAwAAACA
Weblogo: 
PSSM: P0      A      C      G      T
01    655     44   1383     18      r
02    287    346     52   2039      T
03   2039    119     27     18      A
04   2039     34     10      8      A
05   2039      0     29      5      A
06     32   2039      6    251      C
07   2039      0    180      0      A
08   1752    127     53   2039      w
09   1868    171      8     10      A
10   2039     42      7     34      A
11   2039     13     33      8      A
12    145   2039      4    257      C
13   2039      0     30     17      A
Binding TFs: Foxj3_DBD (Fork head domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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