DNA Binding Motif

						

			
Accessions: 1lat_AB (3D-footprint 20231221)

			
Names: GLUCOCORTICOID RECEPTOR
Organisms: Rattus norvegicus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEX
Length: 11
Consensus: gGrACATGwTC
Weblogo: 
PSSM: P0      A      C      G      T
01     16      8     64      8      g
02      0      0     96      0      G
03     56      8     24      8      r
04     96      0      0      0      A
05      0     96      0      0      C
06     96      0      0      0      A
07      0      0      0     96      T
08      0      0     96      0      G
09     24     16      8     48      w
10      0      0      0     96      T
11      0     96      0      0      C
Type: Heterodimer
Binding TFs: 1lat_A (Zinc finger, C4 type (two domains))
1lat_B (Zinc finger, C4 type (two domains))
Binding Sites: 1lat_C / 1lat_D
			
Publications: Gewirth D.T, Sigler P.B. The basis for half-site specificity explored through a non-cognate steroid receptor-DNA complex. Nature structural biology 2:386-94 (1995). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.