DNA Binding Motif

						

			
Accessions: MSC_methyl_6 (HT-SELEX2 May2017)

			
Names: MSC
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: yrACAGCTGTyr
Weblogo: 
PSSM: P0      A      C      G      T
01    528   2762   1196   1856      y
02   4449    326   1892     59      r
03   6341   1340    948     21      A
04      0   6341      0      0      C
05   6341      3      0      0      A
06      0      0   6341    144      G
07    172   6341     15      0      C
08      0     17      6   6341      T
09      0      0   6341      2      G
10      6    863   1259   6341      T
11     40   1967    408   4374      y
12   1970   1188   2610    574      r
Binding TFs: MSC (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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