DNA Binding Motif

						

			
Accessions: MA0611.2 (JASPAR 2024)

			
Names: Dux
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 16
Consensus: ywGATTbAATCAcwww
Weblogo: 
PSSM: P0      A      C      G      T
01    543    971    761    792      y
02    830     70    248   1919      w
03    118     16   2896     37      G
04   3041      9      6     11      A
05     18     10     58   2981      T
06      8    220     22   2817      T
07    409    920    827    911      b
08   2985     22     48     12      A
09   3025     22      5     15      A
10      9      6      3   3049      T
11     30   2912      7    118      C
12   2766     47     23    231      A
13    743   1196    623    505      c
14    885    551    408   1223      w
15    768    675    704    920      w
16    954    664    543    906      w
Type: Heterodimer
Binding TFs: A1JVI8 (Homeobox domain)
A1JVI8
Binding Sites: MA0611.2.1 / MA0611.2.2
MA0611.2.10 / MA0611.2.13
MA0611.2.11 / MA0611.2.15
MA0611.2.12 / MA0611.2.16
MA0611.2.13 / MA0611.2.20
MA0611.2.14
MA0611.2.15
MA0611.2.16
MA0611.2.17
MA0611.2.18
MA0611.2.19
MA0611.2.2 / MA0611.2.4
MA0611.2.20
MA0611.2.3 / MA0611.2.5
MA0611.2.4 / MA0611.2.6
MA0611.2.5 / MA0611.2.7
MA0611.2.6 / MA0611.2.8
MA0611.2.10 / MA0611.2.7
MA0611.2.11 / MA0611.2.8
MA0611.2.12 / MA0611.2.9
MA0611.2.1
MA0611.2.14
MA0611.2.17
MA0611.2.18
MA0611.2.19
MA0611.2.3
MA0611.2.9
			
Publications: Young JM, Whiddon JL, Yao Z, Kasinathan B, Snider L, Geng LN, Balog J, Tawil R, van der Maarel SM, Tapscott SJ. DUX4 binding to retroelements creates promoters that are active in FSHD muscle and testis. PLoS Genet : (2013). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.