DNA Binding Motif

						

			
Accessions: M0704 (AthalianaCistrome v4_May2016)

			
Names: AT1G19040.DAP, T03685;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: wwrCTTGsrgmrCAAG
Weblogo: 
PSSM: P0      A      C      G      T
01    198      0      7    376      w
02    324      3     85    169      w
03    343     46    158     34      r
04      3    577      0      1      C
05      0      0    130    451      T
06      0      0      0    581      T
07     22      8    551      0      G
08    114    166    204     97      s
09    198     54    243     86      r
10    103    103    298     77      g
11    184    184     74    139      m
12    151    121    200    109      r
13     16    534     19     12      C
14    581      0      0      0      A
15    500     81      0      0      A
16      0      0    581      0      G
Binding TFs: T03685 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.