DNA Binding Motif
| Accessions: | UP00583A_1 (UniPROBE 20160601) |
| Names: | TGME49_306620, TGME49_306620 AP2IX-9 |
| Organisms: | Toxoplasma gondii |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 14 |
| Consensus: | wchCAGTGymasrs |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.27 0.10 0.22 0.42 w 02 0.23 0.45 0.13 0.20 c 03 0.28 0.32 0.11 0.29 h 04 0.04 0.93 0.01 0.03 C 05 0.99 0 0.01 0 A 06 0 0.02 0.97 0 G 07 0.14 0.08 0 0.77 T 08 0 0 0.99 0 G 09 0 0.38 0 0.61 y 10 0.50 0.32 0.05 0.14 m 11 0.55 0.12 0.15 0.18 a 12 0.13 0.53 0.28 0.07 s 13 0.27 0.13 0.48 0.12 r 14 0.11 0.31 0.47 0.11 s |
| Binding TFs: | UP00583A (AP2 domain) |
| Binding Sites: | AGTGCACT GCAGTGCA ACACTGGA ACACTGTG ACAGTGTA AGTGCAAT ATACACTG CAGAGCAA CAGTGCAA CAGTGCAC CAGTGCAG CAGTGCTA CAGTGTAA CAGTGTAC CAGTGTAG CAGTGTCA CAGTGTTA CCAGTGTA TACACTGA TCAGTGCA |
| Publications: | Radke JB, Lucas O, De Silva EK, Ma Y, Sullivan WJ Jr, Weiss LM, Llinas M, White MW. ApiAP2 transcription factor restricts development of the Toxoplasma tissue cyst. Proc Natl Acad Sci U S A 110:6871-6 (2013). [Pubmed] |
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