DNA Binding Motif

						

			
Accessions: M0668 (AthalianaCistrome v4_May2016)

			
Names: ANAC045.ampDAP, T13400;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CkTGyrgwasAAGyAA
Weblogo: 
PSSM: P0      A      C      G      T
01      4    586      0      0      C
02      0     23    246    321      k
03      0      2      0    588      T
04     81     71    419     19      G
05    144    155     64    227      y
06    190     93    182    125      r
07    142     99    218    131      g
08    197    145     99    149      w
09    263     68    112    147      a
10     20    369    176     25      s
11    590      0      0      0      A
12    468    107     15      0      A
13      0      0    590      0      G
14    102    234     93    161      y
15    420     81      6     83      A
16    576      0      0     14      A
Binding TFs: T13400 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.