DNA Binding Motif
| Accessions: | UP00045A_1 (UniPROBE 20160601) |
| Names: | kr, Kreisler, Krml, Krml1, Maf1, Mafb, protein B (avian), Segmentation protein KR, Transcription factor MAF1, Transcription factor MafB, v-maf musculoaponeurotic fibrosarcoma oncogene family, V-maf musculoaponeurotic fibrosarcoma oncogene homolog B |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 17 |
| Consensus: | aawwkTGCTGACwwarm |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.42 0.18 0.16 0.24 a 02 0.59 0.06 0.20 0.15 a 03 0.65 0.02 0.05 0.27 w 04 0.34 0.10 0.05 0.51 w 05 0.17 0.08 0.27 0.48 k 06 0.04 0.03 0 0.92 T 07 0.01 0 0.97 0.01 G 08 0.03 0.95 0 0.01 C 09 0.02 0.01 0 0.97 T 10 0.02 0 0.93 0.05 G 11 0.98 0.01 0.01 0.01 A 12 0.01 0.89 0.02 0.08 C 13 0.26 0.11 0.24 0.39 w 14 0.33 0.15 0.09 0.43 w 15 0.54 0.11 0.24 0.11 a 16 0.26 0.07 0.49 0.18 r 17 0.31 0.31 0.17 0.22 m |
| Binding TFs: | UP00045A (bZIP Maf transcription factor) |
| Binding Sites: | AAGTCAGC AATCAGCA AATGCTGA ACGTCAGC ACTCAGCA AGTCAGCA AGTGCTGA ATCAGCAC ATGCTGAC ATTGCTGA ATTTGCTG CGTCAGCA CTGCTGAC GCTGACAC GCTGACGA GGTCAGCA GTCAGCAA GTCAGCAC TCAGCAAA TGCTGACA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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