DNA Binding Motif

						

			
Accessions: 1lq1_AB (3D-footprint 20231221)

			
Names: Stage 0 sporulation protein A
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation Bacteria
Length: 12
Consensus: CAAnnnnCGACA
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02     96      0      0      0      A
03     67     11      9      9      A
04     24     24     24     24      n
05     24     24     24     24      n
06     24     24     24     24      n
07     24     24     24     24      n
08      0     96      0      0      C
09      0      0     96      0      G
10     67     11      9      9      A
11      0     96      0      0      C
12     67     11      9      9      A
Type: Heterodimer
Binding TFs: 1lq1_A (Sporulation initiation factor Spo0A C terminal)
1lq1_B (Sporulation initiation factor Spo0A C terminal)
Binding Sites: 1lq1_G
1lq1_H
			
Publications: Zhao H, Msadek T, Zapf J, Madhusudan , Hoch J.A, Varughese K.I. DNA complexed structure of the key transcription factor initiating development in sporulating bacteria. Structure (London, England : 1993) 10:1041-50 (2002). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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