DNA Binding Motif
Accessions: | GCM2_ONECUT2 (HumanTF2 1.0) |
Names: | GCM2_ONECUT2 |
Organisms: | Homo sapiens |
Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
Length: | 20 |
Consensus: | ATrcGGGyaawmrATCrATa |
Weblogo: | |
PSSM: | P0 A C G T 01 1246 40 197 44 A 02 0 90 10 1443 T 03 594 44 850 0 r 04 295 1443 348 183 c 05 117 4 1443 94 G 06 13 2 1443 2 G 07 0 12 1443 0 G 08 176 613 75 580 y 09 521 248 330 344 a 10 554 309 300 280 a 11 460 292 312 379 w 12 411 384 313 336 m 13 620 53 594 175 r 14 1443 113 265 113 A 15 89 4 15 1443 T 16 28 1443 78 307 C 17 500 13 943 28 r 18 1443 0 0 96 A 19 64 90 6 1443 T 20 641 169 299 335 a |
Type: | Heterodimer |
Binding TFs: | GCM2_TF1 (GCM motif protein) ONECUT2_TF2 (Homeobox domain, CUT domain) ONECUT2_Full (Homeobox domain, CUT domain) |
Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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