DNA Binding Motif
| Accessions: | MA1341.2 (JASPAR 2024) |
| Names: | BZIP53 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 13 |
| Consensus: | wGmTGACGTGGCa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 152 37 63 346 w 02 20 1 503 74 G 03 159 387 50 2 m 04 0 26 0 572 T 05 0 14 529 55 G 06 598 0 0 0 A 07 0 595 1 2 C 08 1 2 595 0 G 09 0 0 0 598 T 10 0 22 576 0 G 11 24 0 450 124 G 12 138 430 14 16 C 13 348 100 81 69 a |
| Type: | Heterodimer |
| Binding TFs: | Q9LZP8 (bZIP transcription factor, Basic region leucine zipper) Q9LZP8 |
| Binding Sites: | MA1341.2.13 MA1341.2.14 MA1341.2.12 MA1341.2.17 MA1341.2.11 MA1341.2.20 MA1341.2.19 MA1341.2.16 MA1341.2.18 MA1341.2.1 MA1341.2.15 MA1341.2.3 MA1341.2.6 MA1341.2.8 MA1341.2.4 MA1341.2.2 / MA1341.2.5 MA1341.2.7 MA1341.2.9 MA1341.2.10 |
| Publications: | Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.