DNA Binding Motif

Accessions: Hoxc10_DBD_1 (HumanTF 1.0)
Names: Hoxc10
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 10
Consensus: gTCrTWAAAw
Weblogo:
PSSM: P0 A C G T
01 298 167 788 0 g
02 6 29 0 788 T
03 78 788 12 53 C
04 791 0 788 0 r
05 0 0 1 788 T
06 576 10 4 212 W
07 788 0 0 22 A
08 788 27 0 23 A
09 788 100 60 157 A
10 371 160 50 207 w
Binding TFs: Hoxc10_DBD (Homeobox domain)
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

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