DNA Binding Motif

						

			
Accessions: Hoxc10_DBD_1 (HumanTF 1.0)

			
Names: Hoxc10
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 10
Consensus: gTCrTWAAAw
Weblogo: 
PSSM: P0      A      C      G      T
01    298    167    788      0      g
02      6     29      0    788      T
03     78    788     12     53      C
04    791      0    788      0      r
05      0      0      1    788      T
06    576     10      4    212      W
07    788      0      0     22      A
08    788     27      0     23      A
09    788    100     60    157      A
10    371    160     50    207      w
Binding TFs: Hoxc10_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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