DNA Binding Motif

						

			
Accessions: GCM1_FOXO1_1 (HumanTF2 1.0)

			
Names: GCM1_FOXO1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 14
Consensus: GtmAATAmGGGyrg
Weblogo: 
PSSM: P0      A      C      G      T
01     23      5    104      5      G
02     42     10     25    127      t
03     44     83      9      8      m
04    127     15     16      2      A
05    127      2     12      2      A
06      0      2      4    127      T
07    127      2     33      0      A
08     70     56     23     11      m
09      6      7    127     20      G
10      0      2    127      0      G
11      1      1    127      0      G
12      5     42      4     85      y
13     74     12     53     13      r
14     11     23     61     31      g
Type: Heterodimer
Binding TFs: FOXO1_TF1 / FOXO1_TF2 (Fork head domain)
GCM1_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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