DNA Binding Motif
| Accessions: | MA1825.1 (JASPAR 2024) |
| Names: | Zm00001d044409 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | wwyCTTATCyg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1019 574 629 901 w 02 1124 488 595 916 w 03 295 1554 370 904 y 04 10 2994 92 27 C 05 20 52 142 2909 T 06 27 1 2 3093 T 07 3099 9 14 1 A 08 25 87 28 2983 T 09 48 3042 10 23 C 10 364 1215 302 1242 y 11 755 762 832 774 g |
| Type: | Heterodimer |
| Binding TFs: | A0A1D6NLI6 (Myb-like DNA-binding domain) A0A1D6NLI6 |
| Binding Sites: | MA1825.1.1 / MA1825.1.2 MA1825.1.10 / MA1825.1.16 MA1825.1.11 / MA1825.1.18 MA1825.1.12 / MA1825.1.20 MA1825.1.13 / MA1825.1.16 MA1825.1.14 MA1825.1.15 MA1825.1.17 MA1825.1.18 MA1825.1.19 MA1825.1.20 MA1825.1.3 / MA1825.1.7 MA1825.1.4 / MA1825.1.9 MA1825.1.10 / MA1825.1.5 MA1825.1.12 / MA1825.1.6 MA1825.1.13 / MA1825.1.7 MA1825.1.14 / MA1825.1.8 MA1825.1.15 / MA1825.1.9 MA1825.1.11 MA1825.1.17 MA1825.1.19 MA1825.1.3 MA1825.1.4 MA1825.1.5 MA1825.1.6 MA1825.1.8 |
| Publications: | Rose A, Meier I, Wienand U. The tomato I-box binding factor LeMYBI is a member of a novel class of myb-like proteins. Plant J 20:641-52 (1999). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.