DNA Binding Motif
| Accessions: | UP00092A_1 (UniPROBE 20160601) |
| Names: | AI550390, c-myb, M16449, MGC18531, Myb, Myb proto-oncogene protein, myeloblastosis oncogene |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 17 |
| Consensus: | wtkdmAACCGTTAwwht |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.33 0.22 0.18 0.28 w 02 0.21 0.10 0.20 0.49 t 03 0.22 0.15 0.35 0.28 k 04 0.26 0.15 0.32 0.27 d 05 0.38 0.26 0.14 0.22 m 06 0.76 0.01 0.15 0.08 A 07 0.83 0.01 0.09 0.08 A 08 0.03 0.96 0 0.01 C 09 0.01 0.83 0.16 0.01 C 10 0 0 0.99 0 G 11 0.01 0.01 0.01 0.98 T 12 0.01 0.23 0 0.76 T 13 0.68 0.02 0.18 0.11 A 14 0.31 0.19 0.11 0.39 w 15 0.33 0.23 0.08 0.35 w 16 0.29 0.30 0.08 0.33 h 17 0.24 0.21 0.22 0.33 t |
| Binding TFs: | UP00092A (Myb-like DNA-binding domain, Myb-like DNA-binding domain) |
| Binding Sites: | AAACCGTC AAACCGTT AAACGGTT AACCGTCA AACCGTCG AACCGTTG AACGGTCA AACGGTCG AACGGTTA AACGGTTC AACGGTTG ACCGTTAT AGCCGTTA ATCCGTTA CAACCGTC CAACGGTC CAACTGCC GACCGTTA GACGGTTA CAACCGAC |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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