DNA Binding Motif

						

			
Accessions: MA1111.1 (JASPAR 2024)

			
Names: NR2F2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: yaAAGGTCAar
Weblogo: 
PSSM: P0      A      C      G      T
01    488    692    418    606      y
02   1027    456    320    401      a
03   1788     37    173    206      A
04   2084     15     82     23      A
05     37     16   2108     43      G
06     33     12   2132     27      G
07     17     22     30   2135      T
08     30   1978     26    170      C
09   2111     16     43     34      A
10    633    503    544    524      a
11    847    384    572    401      r
Type: Heterodimer
Binding TFs: P24468 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
P24468
Binding Sites: MA1111.1.1
MA1111.1.10
MA1111.1.11
MA1111.1.12
MA1111.1.13
MA1111.1.14
MA1111.1.15
MA1111.1.16
MA1111.1.17
MA1111.1.18
MA1111.1.19
MA1111.1.2
MA1111.1.20
MA1111.1.3
MA1111.1.4
MA1111.1.5
MA1111.1.6
MA1111.1.7
MA1111.1.8
MA1111.1.9
			
Publications: Cooney AJ, Tsai SY, O'Malley BW, Tsai MJ. Chicken ovalbumin upstream promoter transcription factor (COUP-TF) dimers bind to different GGTCA response elements, allowing COUP-TF to repress hormonal induction of the vitamin D3, thyroid hormone, and retinoic acid receptors. Mol Cell Biol 12:4153-63 (1992). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.