DNA Binding Motif

						

			
Accessions: M0375 (AthalianaCistrome v4_May2016)

			
Names: AT5G45580.ampDAP, T24304;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: aaaarGAATmTTyy
Weblogo: 
PSSM: P0      A      C      G      T
01    259     85    121    135      a
02    264     97    112    127      a
03    347     27    126    100      a
04    251     75    141    133      a
05    178     93    329      0      r
06      0      0    600      0      G
07    586     14      0      0      A
08    599      1      0      0      A
09      0      0      0    600      T
10    242    356      0      2      m
11     29      0      1    570      T
12     63     18      3    516      T
13     61    291     44    204      y
14     85    173     97    245      y
Binding TFs: T24304 (Myb-like DNA-binding domain, MYB-CC type transfactor, LHEQLE motif)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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