DNA Binding Motif

						

			
Accessions: HOXA6_methyl_2 (HT-SELEX2 May2017)

			
Names: HOXA6
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: rtCrTTAw
Weblogo: 
PSSM: P0      A      C      G      T
01   1898    679   2662    115      r
02    859   1341    536   4560      t
03    300   4560    284    304      C
04   3087     50   4560      0      r
05     22    138     31   4560      T
06   1206    316     34   4560      T
07   4560    157    579    728      A
08   1641    775    827   1318      w
Binding TFs: HOXA6 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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