DNA Binding Motif

						

			
Accessions: M0512 (AthalianaCistrome v4_May2016)

			
Names: MS188.ampDAP, T25962;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: raaaArkTAGGTrrr
Weblogo: 
PSSM: P0      A      C      G      T
01    228     95    149    119      r
02    268     77    119    127      a
03    308     85    105     93      a
04    364     16     66    145      a
05    465      2     26     98      A
06    286      6    286     13      r
07      0      0    255    336      k
08      0      0      0    591      T
09    540      3      1     47      A
10      0      0    591      0      G
11      1      0    502     88      G
12      0      0      0    591      T
13    255      7    303     26      r
14    253     54    224     60      r
15    283     45    225     38      r
Binding TFs: T25962 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.