DNA Binding Motif
| Accessions: | UP00085A_1 (UniPROBE 20160601) |
| Names: | 31 kDa transforming protein, Dis-1, Dis1, PU.1, SFFV proviral integration 1, SFFV proviral integration 1 protein, Sfpi-1, Sfpi1, Spi-1, Spi1, Tcfpu1, Tfpu.1, Transcription factor PU.1 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 14 |
| Consensus: | ydawgvGGAAsTdm |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.21 0.27 0.23 0.28 y 02 0.30 0.10 0.29 0.31 d 03 0.59 0.05 0.15 0.20 a 04 0.46 0.05 0.17 0.32 w 05 0.19 0.16 0.59 0.06 g 06 0.40 0.29 0.29 0.02 v 07 0.05 0 0.95 0 G 08 0 0 0.99 0 G 09 0.97 0 0 0.02 A 10 0.94 0 0 0.06 A 11 0.05 0.27 0.67 0.01 s 12 0.06 0.09 0.03 0.83 T 13 0.30 0.12 0.27 0.31 d 14 0.28 0.28 0.22 0.23 m |
| Binding TFs: | UP00085A (Ets-domain) |
| Binding Sites: | AAACTTCC AACTTCCC AACTTCCG AACTTCCT ACTTCCCA ACTTCCCC ACTTCCCT ACTTCCGC ACTTCCGG ACTTCCTC AGCGGAAG AGGAAGTA AGTTCCCC AGTTCCTC ATGCGGAA CACTTCCC CTTCCGCA GGAAGTAA GGGAAGTA TTCCGGAA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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