DNA Binding Motif

						

			
Accessions: UN0553.2 (JASPAR 2024)

			
Names: GCM2::HOXA13
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 14
Consensus: ATRCGGGTaATAAA
Weblogo: 
PSSM: P0      A      C      G      T
01   5476    695   1108    191      A
02    215    122     72   7121      T
03   1924     92   5208     39      R
04    973   5940    798    653      C
05    157     37   7104     60      G
06      0      0   7191      0      G
07      0      0   7186      0      G
08     84    782    140   6984      T
09   6107   1975    190    837      a
10   7063    356    471    629      A
11    279    366    584   7103      T
12   6742    345    953   1602      A
13   7045    297    356    835      A
14   6817    624    648    726      A
Type: Heterodimer
Binding TFs: P31271 (Homeobox domain, Hox protein A13 N terminal)
P31271
			
	
			


			

				

				
				
				
				

			

			

		

	
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