DNA Binding Motif

						

			
Accessions: M0784 (AthalianaCistrome v4_May2016)

			
Names: GT1.DAP, T03295;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 19
Consensus: mmyTAACYrTrGTTaaawy
Weblogo: 
PSSM: P0      A      C      G      T
01    201    112     49     75      m
02    151    116     62    108      m
03     16    164     54    203      y
04     47     18      4    368      T
05    415      3      8     11      A
06    433      0      0      4      A
07      1    431      0      5      C
08      0    320      0    117      Y
09    256     37    116     28      r
10     25     73     39    300      T
11    176      3    258      0      r
12     90     19    300     28      G
13     11     56      8    362      T
14     22     87      0    328      T
15    280     30     68     59      a
16    287     19     51     80      a
17    192     78     89     78      a
18    185     82     25    145      w
19     84    147     55    151      y
Binding TFs: T03295 (Myb/SANT-like DNA-binding domain, Myb/SANT-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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