DNA Binding Motif

						

			
Accessions: M0394 (AthalianaCistrome v4_May2016)

			
Names: At1g25550.ampDAP, T04402;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: dwwwmgAAkATTCy
Weblogo: 
PSSM: P0      A      C      G      T
01    153    120    165    160      d
02    239     95     85    179      w
03    281     63     90    164      w
04    161    129     50    258      w
05    189    175     91    143      m
06    123     82    309     84      g
07    459     29     45     65      A
08    589      0      4      5      A
09      0      0    365    233      k
10    598      0      0      0      A
11      0      0      0    598      T
12     14      9      1    574      T
13      0    598      0      0      C
14     32    277     37    252      y
Binding TFs: T04402 (Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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