DNA Binding Motif

						

			
Accessions: 4yg4_B (3D-footprint 20231221)

			
Names: Antitoxin HipB
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: HipB-O1-O1* complex
Length: 4
Consensus: TCCC
Weblogo: 
PSSM: P0      A      C      G      T
01      7      9      7     73      T
02      7     73      9      7      C
03      7     75      7      7      C
04      7     73      7      9      C
Binding TFs: 4yg4_B (Helix-turn-helix, Helix-turn-helix domain, Cro/C1-type HTH DNA-binding domain, Helix-turn-helix domain, Helix-turn-helix domain)
Binding Sites: 4yg4_F
4yg4_T
			
Publications: Schumacher MA, Balani P, Min J, Chinnam NB, Hansen S, Vulić M, Lewis K, Brennan RG. HipBA-promoter structures reveal the basis of heritable multidrug tolerance. Nature 524:59-64 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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