DNA Binding Motif

						

			
Accessions: ZNF580_methyl_3 (HT-SELEX2 May2017)

			
Names: ZNF580
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 19
Consensus: mCTACCctmcmmCTACCct
Weblogo: 
PSSM: P0      A      C      G      T
01   2302   3296    672    226      m
02    524   5618     51    486      C
03    284    189     86   5754      T
04   5814     70     35     79      A
05     74   5769     30    111      C
06     66   5811      9     20      C
07   1479   4655    385   1312      c
08    842   1521    256   3936      t
09   1778   1939    774   1323      m
10   1334   2715    835    929      c
11   1527   1602   1451   1234      m
12   2640   2958    783    313      m
13    605   5449     84    483      C
14    320    262    148   5675      T
15   5800    101     23    124      A
16     99   5813     39     81      C
17     40   5807     21     20      C
18   1312   4736    629   1484      c
19   1043   1257    377   4016      t
Binding TFs: ZNF580 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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