DNA Binding Motif
| Accessions: | MA2418.1 (JASPAR 2024) |
| Names: | IG1 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 9 |
| Consensus: | CtGCCGCCA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 583 5874 1149 561 C 02 213 1865 663 5426 t 03 91 217 7717 142 G 04 103 7665 293 106 C 05 150 7586 237 194 C 06 166 114 7736 151 G 07 64 7805 188 110 C 08 114 7732 218 103 C 09 5972 443 1478 274 A |
| Binding TFs: | Q32SG3 |
| Binding Sites: | MA2418.1.11 / MA2418.1.12 / MA2418.1.14 / MA2418.1.20 / MA2418.1.6 / MA2418.1.7 / MA2418.1.8 / MA2418.1.9 MA2418.1.16 MA2418.1.1 MA2418.1.10 / MA2418.1.19 MA2418.1.13 MA2418.1.15 / MA2418.1.5 MA2418.1.17 MA2418.1.18 MA2418.1.2 MA2418.1.3 MA2418.1.4 |
| Publications: | Husbands A, Bell EM, Shuai B, Smith HM, Springer PS. LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins. Nucleic Acids Res : (2007;35(19):6663-71.). [Pubmed] |
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