DNA Binding Motif

						

			
Accessions: M0469 (AthalianaCistrome v4_May2016)

			
Names: ASL18.ampDAP, T07310;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: sCggaTTTTccGSmrr
Weblogo: 
PSSM: P0      A      C      G      T
01     36    404    157      3      s
02     13    586      1      0      C
03     94     25    382     99      g
04     47    107    340    106      g
05    262     57    137    144      a
06    138      0     29    433      T
07      7     44      9    540      T
08     56     92      5    447      T
09     39    110     43    408      T
10    126    309    114     51      c
11     84    385     69     62      c
12      0      0    584     16      G
13      8    154    416     22      S
14    206    226     71     97      m
15    216     44    246     94      r
16    210    111    168    111      r
Binding TFs: T07310 (Protein of unknown function DUF260)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.