DNA Binding Motif

						

			
Accessions: 2v2t_AB (3D-footprint 20231221)

			
Names: TRANSCRIPTION FACTOR RELB
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: X-ray structure of a NF-kB p50-RelB-DNA complex
Length: 10
Consensus: GGkAAnTcCC
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02      0      0     96      0      G
03     10      5     55     26      k
04     96      0      0      0      A
05     81      5      5      5      A
06     24     24     24     24      n
07     10      5     12     69      T
08      5     58     16     17      c
09      0     96      0      0      C
10      0     96      0      0      C
Type: Heterodimer
Binding TFs: 2v2t_A (Rel homology domain (RHD))
2v2t_B (Rel homology domain (RHD))
Binding Sites: 2v2t_C / 2v2t_D
			
Publications: Moorthy A.K, Huang D.B, Wang V.Y, Vu D, Ghosh G. X-ray structure of a NF-kappaB p50/RelB/DNA complex reveals assembly of multiple dimers on tandem kappaB sites. Journal of molecular biology 373:723-34 (2007). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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