DNA Binding Motif

						

			
Accessions: 1tro_AG (3D-footprint 20231221)

			
Names: PROTEIN (TRP REPRESSOR)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
Length: 9
Consensus: gtACTGTaC
Weblogo: 
PSSM: P0      A      C      G      T
01     11      7     64     14      g
02     14     22     14     46      t
03     96      0      0      0      A
04      0     96      0      0      C
05      0      0      0     96      T
06      0      0     96      0      G
07      0      0      0     96      T
08     49     10     16     21      a
09      7     78      3      8      C
Type: Heterodimer
Binding TFs: 1tro_A (Trp repressor protein)
1tro_G (Trp repressor protein)
Binding Sites: 1tro_I
1tro_J
			
Publications: Otwinowski Z., Schevitz RW., Zhang RG., Lawson CL., Joachimiak A., Marmorstein RQ., Luisi BF., Sigler PB. Crystal structure of trp repressor/operator complex at atomic resolution. Nature. 335(6188):321-9 (1988). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.