DNA Binding Motif

						

			
Accessions: VAX2_methyl_1 (HT-SELEX2 May2017)

			
Names: VAX2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: sYAATTAs
Weblogo: 
PSSM: P0      A      C      G      T
01   1808   5317   5057   3194      s
02      0   4142      0  11234      Y
03  15376   4508      0      0      A
04  15376      0      0      0      A
05      0      0      0  15376      T
06      0      0   3624  15376      T
07  15376      0      0      0      A
08   3043   4313   6570   1451      s
Binding TFs: VAX2 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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