DNA Binding Motif

						

			
Accessions: MA0784.2 (JASPAR 2024)

			
Names: POU1F1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: CAP-SELEX
Length: 16
Consensus: avCTmATTwGCATAwt
Weblogo: 
PSSM: P0      A      C      G      T
01   2016    492    743    876      a
02   1105   1093   1260    668      v
03    131   3623    372    504      C
04    106    126    220   3907      T
05   2281   1846    192    262      m
06   4127      7     28     31      A
07      0      0      1   4127      T
08     91     13      2   4127      T
09   1564      0      0   2563      w
10    419     67   3708     16      G
11     54   4127      1      3      C
12   4127      9      5     17      A
13      3      3      0   4127      T
14   4127      5      5     59      A
15   2323    165     57   1804      w
16    849    702    384   3278      t
Type: Heterodimer
Binding TFs: P28069 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
P28069
			
Publications: Ingraham H. A., Flynn S. E., Voss J. W., Albert V. R., Kapiloff M. S., Wilson L., Rosenfeld M. G. The POU-specific domain of Pit-1 is essential for sequence-specific, high affinity DNA binding and DNA-dependent Pit-1-Pit-1 interactions. Cell 61:1021-1033 (1990). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.